eagle-i Harvard UniversityHarvard University
See it in Search
This page is a preview of the following resource. Continue onto eagle-i search using the button on the right to see the full record.

Ascore

eagle-i ID

http://harvard.eagle-i.net/i/0000013a-e1aa-5fab-e81d-064c80000000

Resource Type

  1. Algorithmic software suite

Properties

  1. Resource Description
    "Search algorithms like Sequest or Mascot often successfully identify the proper peptide sequence, but fail to provide information about the presence or absence of site-determining ions. As a result, users must manually inspect each spectrum to confirm proper site localization. Here, we present a probability-based score, named the Ascore, which measures the probability of correct phosphorylation site localization based on the presence and intensity of site-determining ions in MS/MS spectra"
  2. Used by
    Gygi Lab
  3. Data Input
    Peptide sequence
  4. Data Input
    Mass spectrometry data
  5. Data Output
    Probability of correct phosphorylation site localization based on the presence and intensity of site-determining ions in MS/MS spectra
  6. Software purpose
    Sequence analysis objective
  7. Related Publication or Documentation
    A novel probability-based approach for high-throughput protein phosphorylation analysis and site localization
  8. Website(s)
    http://ascore.med.harvard.edu
 
RDFRDF
 
Provenance Metadata About This Resource Record

Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016