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Birdseye

eagle-i ID

http://harvard.eagle-i.net/i/0000013a-6b0b-f6ad-5088-2eef80000000

Resource Type

  1. Algorithmic software component

Properties

  1. Resource Description
    Used as a component of Birdsuite to discover rare or de novo Copy number variants.
  2. Contact
    Birdsuite Help Desk
  3. Manufacturer
    Broad Institute
  4. Used by
    Broad Institute
  5. Operating System
    LINUX
  6. Operating System
    UNIX
  7. Data Input
    Genomic Sequence data
  8. Data Output
    Rare or de novo Copy Number Variant (CNV) calls
  9. Software purpose
    Sequence comparison objective
  10. Related Publication or Documentation
    Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs
  11. Related Publication or Documentation
    Birdsuite Manual
  12. Website(s)
    http://www.broadinstitute.org/science/programs/medical-and-population-genetics/birdsuite/birdsuite-overview-0
  13. Related Technique
    Copy number variation profiling
  14. Algorithm used
    Hidden Markov Model
  15. Coded in
    R language
 
RDFRDF
 
Provenance Metadata About This Resource Record

Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016